species:   Artha
pid:       MI0005387
parent:    ath-MIR831
paralog:   
locus:     2:10247206-10247462
matures:   ['AGAAGCGUACAAGGAGAUGAGG', 'UGAUCUCUUCGUACUCUUCUUG']
srr:       SRR9216053
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram 2:10247206-10247462

0 out of bounds
2 alignments
2 proper strand
2 stranded perfect matches

                                                   ************************                                                                                                           ************************                                                   
GCACAAUGCGGACAGUGCUACAAGAAGAGAUUUAUAGAGUCUUAAGAGUCUCAAGAAGCGUACAAGGAGAUGAGGAGUGAAUCACCAAAACAAGUGGUUUUGGUUUGUGAAUCACCAAAACAAGUGGUUUUGGUUUGUGAAUCAGUAUGGUUUACCCAAAACACUUGUUUGGUGUGUUUACUUCUGAUCUCUUCGUACUCUUCUUGCGAUUCUAUGACACUCUACAUGUAACAUCGGCAUGGUUUACCAAAAAGCCU
.....((((.((...((.((((.(.((((..((((((((((..........(((((((.((((.(((((((.(((((((((((((((((.((((((.((((((..........((((((((.....))))))))..((((((((...))))))))))))))))))))))))))).)))))))))).))))))).)))).))))))).))))))))))..)))).).)))).)))).))))(((((......))))).
-----------------------------------------------------AGAAGCGUACAAGGAGAUGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=0 c
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGAUCUCUUCGUACUCUUCUUG--------------------------------------------------- l=22 a=2 c*
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGAUCUCUUCGUACUCUUCUUG--------------------------------------------------- l=22 a=2 ma
-----------------------------------------------------AGAAGCGUACAAGGAGAUGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=0 ma*

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGAUCUCUUCGUACUCUUCUUG--------------------------------------------------- l=22 a=2 (c*,ma)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-011
